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Glia f5 files have an extra block of data. See if these can be loaded without compromising performance or maintainability.
[Example file](https://github.com/BlueBrain/NeuroM/files/457174/glia.zip)
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Hi there,
I was following the tutorials and in tutorial 5 where we have to use the pre-defined HMMs where we use euk100_kegg94, I downloaded it and moved it to the RAVEN directory where all the dep…
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This is a big discussion to have. There are other approaches to standardization and it is important to clearly lay out the pros and cons.
## Platforms
* Pathway Tools by Peter Karp's group
* KB…
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I tried to work on the Harvetta model, in which the LB and UB on the reactions are -1,000,000 and 1,000,000. I was not even able to load the .mat file of the model using jupyter notebbok due to this e…
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Hi, I want to run micom 0.10.1 on the carveme_refseq84_genus.qza and the western_diet_gut_carveme.qza artifacts.
The model was created without any errors, but when I run the micom tradeoff command:
…
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**An Alternative Heat-Budget Model Relevant to Heat Transfer in Fishes and Its Practical Use for Detecting Their Physiological Thermoregulation**
https://bioone.org/journals/Zoological-Science/volume…
ys634 updated
3 years ago
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### Description of the issue:
* This issue propose to include a `metadata` section to the yaml file specification in RAVEN
- Previously, a `metadata` section was introduced to the tailored `yaml…
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使用StyleText批量生成图像结果不成功，执行：python tools/synth_dataset.py -c configs/dataset_config.yml
dataset_config.yml文件内容：
Global:
output_num: 10
output_dir: output_data
use_gpu: false
image_height: …
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Hi Christian,
I installed q2-micom on qiime2 environment following tutorials (https://github.com/micom-dev/q2-micom/blob/master/docs/README.md) and cplex (CPLEX_Studio128/cplex/python/3.6/x86-64_li…
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Hello, again Francisco!
So after the extractProteinbins step, I had 93 .faa files. I ran the 'bash metaGEM.sh -t carveme -j 93 -c 4 -m 20 -h 4' command after this and ended up with only 47 models i…