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I'd also remind the students on the front page exactly what they did - How many body samples over how long of a period of time
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Add mouseover definitions for technical terms:
- [x] OTU
- [x] beta diversity
- [x] alpha diversity
- [x] ordination
@gregcaporaso will add definitions here, and @jrrideout will add the mouseover fu…
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1). Split each OTU into sample and control tables to determine which negative control otus to substract
a). echo "split_otu_table.py -i /home/gifl2111/scratch/SMP/split_otu_table_by_body_site/Fore…
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Jonathan suggested using the best-understood microbial ecosystem for the paper. We could analyze enterotypes, and at the very least should analyze the HMP mock communities. HMP mock community data is …