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Dear mmseq2 team
I am trying to create taxonomy database for ncbi nr data base. First I downloaded nr.fa, taxdump and prot.accession2taxid. Then I ran the below commands
mmseqs createdb nr.fa nr…
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Hi Aequos team,
I'm hitting the same problem as the original poster of [this issue ](https://github.com/aequos-solutions/modern-data-visualizer/issues/67) i.e., getting no results when picking a te…
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Command:
```
straingst run --iterations 5 \
--minfrac 0.01 --separate-output \
-o NTC_taxid-1472416 \
1472416.hdf5 NTC.hdf5
```
Error:
```
Command error:
2023-04-10 23:45:…
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Hello,
I get the following error while running PanGIA.
Traceback (most recent call last):
File "./pangia.py", line 2278, in
genome_size, host_genome = getStrainSize( argvs.database )
F…
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Hello,
I am encountering an error when using the enrichKEGG function from the clusterProfiler package with my own created library for Klebisella pneumoniae subsp. pneumoniae HS11286 (taxid: 1125630).…
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Hello,
I built Diamond database using;
`diamond makedb --in nr.gz \
–db nr_diamond
–taxonmap prot.accession2taxid.FULL
–taxonnodes nodes.dmp
–taxonnames names.dmp
–threads 72`
and run diam…
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This is one component of #375
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## Expected Behavior
Taxonomy database created based on a `seqdb` created from UniProt sequences
## Current Behavior
Program crashed with `core dumped` error and reports `Error: createbintaxo…
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It appeared in the result of running ktImportBLAST.