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In this issue we will track tests of different SOI-detection-related functions (RHermes -> XCMS format) and also ROI/ChromPeak-annotation functions (XCMS -> RHermes).
The general objectives of thes…
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I ran into an issue with humanml.py when processing samples like CMU/80/80_63_poses.npy. It seems that the start and end indices in humanml_index.csv don't match the length of the sequence. For instan…
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Discovered by a LungMAP user. Files with null DRS URIs are not downloadable from the Files tab in the Data Browser but do appear in the file manifest for bulk file download via curl.
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Epic:
### Description
**User**: A scientist with a lot of biological and computational skills and basic knowledge of GitHub.
**Use Case**: I have just completed a version of a taxonomy (AIT99) tha…
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[Ticket 24609](https://support.nceas.ucsb.edu/rt/Ticket/Display.html?id=24609)
[Dataset](https://arcticdata.io/catalog/view/urn%3Auuid%3A1c42e058-6d10-43d7-8003-45be43ea4d80#urn%3Auuid%3Aa57a87c5-c0b…
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Use [SAM](https://segment-anything.com) to generate segment mask proposals then convert those to bounding boxes.
- Create an upload page for csv of point annotations
- Ping the SAM endpoint that @…
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# BLUF
Remove the logic in Dojo UI that appends fileData to dataset metadata info, and instead modify the RegistrationStepper code to do the following:
1. Use information from annotations.metada…
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I would like the images and annotations for cars and people only in the COCO dataset. I would also like to have them in a csv format. Can anybody point me in a good direction?
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Tried following the tutorial with the provided testing data files in `songexplorer/bin/songexplorer/test/data`, but was unable to open any files in the "recording" dropdown (section "Manually Annotati…
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I got a problem shown below when i conduct the celseq2 pipeline.
shakename v 5.5.2 is installed
Some parts of the configfiles is
> ##Annotations##
> ##Where is the GTF.gz/GFF.gz/GTF/GFF …