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When I perform a GWAS on the example data, I cannot retrieve any p-values in the `normal.res$D` dataframe.
Here is the script that I've run:
```
require(RAINBOWR)
#> Loading required package: R…
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Hi Gib,
I'm having trouble generating an access token. Am I doing something wrong?
Thanks
Matt
```
> library('ieugwasr')
API: public: http://gwas-api.mrcieu.ac.uk/
> get_access_token()
U…
mcgml updated
4 years ago
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Hello!
Can you please clarify if the covariance file provided on Zenodo was made with all five populations of 1000G and not just EUR. I read it in the first paper of MetaXcan, but I still wanted to c…
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I haven't looked into the functionality of `geoparse`, but I was able to get this working with `rentrez` last week:
```r
geo_template
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Hi.
I'm following the example analysis for LDL -> CAD
I have run the ld_prune function. ..pruned
gnarw updated
4 years ago
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/whweve/IntAssoPlot
Confirm the following by editi…
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Hi,
Sorry to bother with this request.
I have my own summary statistics that I am using as JSON file for a region and am using your server API LDLZ2 for LD information.
What I really would like to…
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Guidelines:
```
You are allotted 2,300 characters (excluding spaces) for the body text of your abstract. Title, author, and institutional data are not included in the 2,300 characters. See Step-by…
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Hi,
First of all, thank you developing TWAS/FUSION. I am running it also for integrating GWAS and sQTL catalogues (including CMC splicing weights shared here: http://gusevlab.org/projects/fusion/#…
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Right now we can get the same position twice, with two different rsids, where one rsid has one allele as reference and the other has the other. Or the same phenomena but as strand flips.
```
(base…