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Testing Apollo 2.3.1 with NeathHTMLFeatures and NeatCanvasFeatures, I get this rendering issue:
 and my own instance has no NeatCanvasFeatures looking (intron hats and a gradient 'tubular' ).
I've tried to follow the https://github.com/GMOD/jbrowse/blob/maste…
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- JBrowse version - jbrowse-1.15.4-release (I want to try out plugins)
- Web browser being used - none yet.
- Operating system if relevant - Ubuntu 16.04
- If it is setup related, setup.log (see be…
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I am seeing strange rendering of introns with apollo 2.3.0, which may be related to making NeatHTMLFeatures the new default. A quick screen grab...
 and #959 (doc) and fixing the #519 (change to security library needed to get handlers).
Based on the excellent wo…
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Need to know if an adapter can i.e. fetch sequences, features, aliases, etc.
Probably just a static array on the adapter class that defines a list of these (keep a master list somewhere?)
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I want to be able to display a specific gene on an organism with public mode set, using a URL query string. So, I thought I could use something along the lines of:
domain/organism name/jbrowse/inde…
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I noticed that the FlyBase JBrowse has fancier transcript features than we do:
http://flybase.org/jbrowse/?data=data%2Fjson%2Fdmel&loc=2L%3A7287851..7334000&tracks=Gene%2Cprotein_domains%2CcDNA&hig…
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All the plugins developed so far have been core plugins, so I decided to create and test a simple non-core menu bar for testing before I create the core Main Menu Bar.
I also added a Yeoman generat…