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Submitting Author: Selcen Ari (@selcenari)
Repository: selcenari/ceRNAnetsim
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- Paste the full DESCRIPTION file inside a code block below:
```
Type: Package
Package: ceRNAnetsim
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Hi Tobias,
I am attempting to run DCC on my data but the program does not pass the 'Filtering by read counts' step. I have the most recent version from GitHub installed.
Here is the log file fr…
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Hello,
kallisto (0.44.0) seems to be silently dropping sequences from the index.
Working example:
- download circBase hg19 circRNA sequences.
- count them (140790)
- index them and count ag…
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CircRNACount is supposed to be output by DCC, but I receive an error that it does not exist a few seconds after running DCC from the command line.
1. Command line used for the command
DCC \
@dc…
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I have finsh my circRNA work with CIRI_v2.0.6, and get nearly 20000 circRNAs from each sample. Then i start my work with find_circ2,but i got no results at the last step. I don't the reason.
This i…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/Aufiero/circRNAprofiler
Confirm the following by …
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I'm merging results between samples using the output from the denovo circularRNA_full.txt file. I'm trying to compare the exon structure not just start and end coordinates to ensure a perfect match …
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Thanks for your work of circRNA.
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Dear Tobias,
please add circular over total count ration to spreadsheet output.
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Dear Dieterich-lab,
I'm having some issues running DCC (version 0.4.7) which I hope you can help me with.
I'm trying to run the software in a virtual environment on python version 2.7.15rc1
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