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From: https://trello.com/c/tLwokYuo
From Monica Poelchau
Based on an annotator comment who wanted a reference sequence slice when zoomed out. Setting 'ALWAYS_SHOW=true' in the deployed root (jbrowse…
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We are currently using JBrowse and Dalliance together, since JBrowse has the nice faceted track selection and incremental search, but Dalliance has SVG and PNG export capabilities. It would be nice if…
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Data: [jbrowse_embed_test.tar.gz](https://github.com/GMOD/jbrowse/files/2507329/jbrowse_embed_test.tar.gz)
To reproduce:
```bash
wget https://github.com/GMOD/jbrowse/files/2507329/jbrowse_embed_t…
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Hi Jim et al.
What are your thoughts about plugin support? I was looking at JBrowse the other day and saw some enormously interesting plugins (mygene/myvariant.info API support? Automated CSQ parsi…
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I would like clarification on this issue. Perhaps it is a matter of refreshing my mind. What was the idea behind removing the search box that allows curators to navigate to a specific set of coordinat…
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Hello,
I would like to download the fasta sequences of my genes in a specific location (as it is possible in BED, GFF or tabulated file), I did not find out to do it, is-it possible ?
Best regar…
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should be able to import GA4GH endpoints:
https://github.com/ga4gh/server
reference:
http://ga4gh-reference-implementation.readthedocs.org/en/latest/demo.html
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Related to #1148. @cmdcolin
I have this grid:
http://test.parasite.wormbase.org/jbrowse/index.html?data=%2Fjbrowse-data%2Fcaenorhabditis_elegans_prjna13758%2Fdata&loc=X%3A937771..957837&tracks=D…
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Hi,
We have a situation where 2 out of ca. 2,000 contigs in Apollo have jammed User-created annotation areas due to the error message in the attached screenshot. By "jammed" I mean that the annotat…
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Create a drupal page in lis-stage for iframing JBrowse (after testing in peanutbase).
For April rollover.
[LEGUME-285] created by sdash-legume