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Dear beifang,
Sorry liberty to disturb. I'm hongsen qu and a new for MSIsenor from China. Recently I have install MSIsenor and run the command "bash run.sh" for test,then I got the MSI score 10…
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Hello!
I am a pathologist and a doctoral student from Estonia. My research field are stromal changes in cancer. I ve been using blinding so far to achieve an impersonal result. Recently appeared an o…
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Hi,
I am using the classifier to detect positive and negative cells in a tumor, I am measuring them in three different areas: 500µm outside of the tumor (green), the whole tumor (blue) and tumor c…
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We should have a paragraph on prior applications of tHMMs since there are one or two. I would also mention linkage analysis here, and analysis of incomplete penetrance in family trees.
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Hi Brad, I see that Titancna now complain about cytoband with hg19/GRCh37 .
Thanks!
Alessandro
Error in cytoband[, "chrom"] : incorrect number of dimensions
[2018-10-26T01:17Z] lt14: Optimal …
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Hi,
I've read your paper and I'm wondering why RetinaNet works better than MaskRCNN for lung lesion detection with 2D or 2Dc inputs. I think in most cases, a two-stage detector should be better than …
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Hey Dario,
I have come across some memory issues with my cnv_facets jobs. They occur at different parts of the analysis. For eg...
1)
```
Read 39769793 rows and 6 (of 12) columns from 1.249 …
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Hi! I installed the HoneyBADGER on MacOS with R 3.5.0. Afterwards went though tutorial and everything worked fine. My main question: is the package suitable for 3' focused 10X data? Are there some set…
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Dear Bcbio Team,
I upgraded bcbio recently to v1.1.5 and I am getting below error when running gatk-variant pipeline.
[April 28, 2019 10:11:25 AM AST] org.broadinstitute.hellbender.tools.spark.A…
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Hi,
Does the merge.idx.stats.pdf file have a control access? It seems I couldn't download this file successfully.
Thanks
mt831 updated
6 years ago