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Priority = understand genomic and proteomic changes over time of treatment
http://harvardforest.fas.harvard.edu/ellison/current-research/ants/harvard-climate-response
Why use networks?
What do gene…
MKLau updated
8 years ago
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> ExpressionSet has proven a cornerstone of microarray and bulk RNA-seq analysis methods in Bioconductor, but extensions to it are desirable to add capabilities for scRNA-seq analyses.
Bit too flower…
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Dear all,
I would like to submit a _Bioconductor_ package called aracne.networks. This package contains gene regulatory networks extracted from the biggest cancer dataset ever created (TCGA). These n…
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Our abstract:
PAPER: 31
TITLE: GRNmap and GRNsight: open source software for dynamical systems modeling and visualization of medium-scale gene regulatory networks
AUTHORS: Kam D. Dahlquist, Ben G. Fit…
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The GRNsight manuscript was submitted to PeerJ Computer Science on May 18, 2016 with simultaneous submission to the PeerJ Preprint server. Submission ID is 10823.
It will now be checked by PeerJ sta…
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Dear all,
I would like to submit a Bioconductor package called aracne.networks. This package contains gene regulatory networks extracted from the biggest cancer dataset ever created (TCGA). These net…
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Hi Chris
Gitter is down atm (and github very slow) so I use an issue to write down stuff, hope thats ok.
1) The idea of multiscalemodels is brilliant. Your approach made it so much more general too.…
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Hi Chris,
http://www.ncbi.nlm.nih.gov/pubmed/24844197
"Thus, while sponges contain only a limited number of direct orthologues of genes involved in body plan patterning in the eumetazoans, all of th…
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- Repository: https://github.com/AndreaRMICL/MetaboSignal
- [x] I understand that by submitting my package to _Bioconductor_,
the package source and all review commentary are visible to the
genera…
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error was like:
Building CXX object cartograp...nary.dir/lua_parameter_dictionary.cc.o
FAILED: /usr/bin/c++ -O3 -DNDEBUG -isystem /usr/local/include -isystem /usr/include/eigen3 -I. -I.. -I../c…