dondi GRNsight issues - Githubissues

dondi / GRNsight

Web app and service for modeling and visualizing gene regulatory networks.

http://dondi.github.io/GRNsight

BSD 3-Clause "New" or "Revised" License

17 stars 8 forks source link

issues

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Fixing PR #1112 to Restrict D-pad

#1114 ceciliazaragoza closed 2 months ago
0
#1106 Writing Scripts for Updating Database and Refactor Code

#1113 ntran18 opened 2 months ago
0
Issue #1083 When check restrict graph to viewport the D-pad and zoom slider do not disappear and graph cannot exceed viewport

#1112 ceciliazaragoza closed 2 months ago
5
#1106 fixing off-by-one column issue.

#1111 ntran18 closed 2 months ago
0
Export Data & Image Fix #1109 (Issue #1081 Node Coloring Top Menu Availability of Options)

#1110 ceciliazaragoza closed 3 months ago
0
Issue #1081 Node Coloring Top Menu Availability of Options

#1109 ceciliazaragoza closed 3 months ago
2
When exporting to Excel, the option to export the "network_weights" sheet should be available at all times

#1108 kdahlquist opened 3 months ago
0
When exporting to Excel, default value for alpha on the optimization_parameters sheet should be 0.02, not 0.002

#1107 kdahlquist opened 3 months ago
0
ERT1 not in network database

#1106 kdahlquist opened 3 months ago
21
Update network and protein protein database

#1105 ntran18 closed 3 months ago
1
Update People page with UGRS in-person photo

#1104 dondi closed 2 months ago
4
Error with import function on beta

#1103 nchun2 closed 3 months ago
2
Further testing opening sif files for GRNs and PPIs

#1102 kdahlquist opened 3 months ago
0
Fix Export SIF

#1101 ntran18 closed 3 months ago
1
Fix issue #1099 to stop loading demo 1 when exporting sif, graphml

#1100 ntran18 closed 4 months ago
1
Exporting file reload demo 1

#1099 ntran18 closed 3 months ago
1
Importing new files has some delays

#1098 ntran18 opened 4 months ago
0
Renamed cell A1 named for protein protein interaction network mode #1054

#1097 ntran18 closed 3 months ago
0
Fixing the network mode for export function #1079

#1096 ntran18 closed 4 months ago
0
Look into Travis user limit for free plan

#1095 dondi opened 4 months ago
1
Continue with #1079, fixing the export for sif and make the variable consistent with other files

#1094 ntran18 closed 4 months ago
4
D-pad, zoom slider, and cursor drag do not move graph after export to SVG

#1093 ceciliazaragoza opened 4 months ago
3
Issue #1083 D-pad, zoom, and cursor drag now working when graph view restricted to viewport

#1092 ceciliazaragoza closed 4 months ago
3
Importing empty network with network tab of Excel file crashes the website

#1091 ntran18 closed 5 months ago
2
make LMU URS poster so it can be printed before the March 15 symposium

#1090 kdahlquist closed 3 months ago
36
Update network database with new data from Intermine/SGD

#1089 kdahlquist opened 5 months ago
8
Setup ssh keys to facilitate GRNsight deployments

#1088 dondi closed 4 months ago
2
Modify cell A1 to detect network mode either grn or protein-protein-interaction #1054

#1087 ntran18 closed 4 months ago
0
Style Updates from Issue #1002

#1086 ceciliazaragoza closed 5 months ago
1
Fixing issue #1072.

#1085 ntran18 closed 4 months ago
3
Test export/import cycle for GRNsight-->GRNsight/GRNmap

#1084 kdahlquist opened 5 months ago
0
Checking restrict graph to viewport makes the D-pad and zoom slider on the viewport disappear

#1083 kdahlquist closed 2 months ago
12
Selecting a particular sequence of view options causes graph to shrink to the size of one node

#1082 kdahlquist opened 5 months ago
2
node coloring top menu availability of options

#1081 kdahlquist closed 2 months ago
1
node coloring glitch when loading network from database

#1080 kdahlquist opened 5 months ago
5
Problems opening .sif and .graphml files

#1079 kdahlquist closed 3 months ago
13
Onboarding for Cecilia & A’Kaia

#1078 dondi closed 2 months ago
22
Release checklist for v7.1

#1077 dondi opened 7 months ago
5
Meeting time for Spring 2024 semester

#1076 kdahlquist closed 5 months ago
9
Adding PPI demo #1065

#1075 ntran18 closed 7 months ago
0
When GRN loaded from file with no expression data, nodes are colored gray instead of white

#1074 kdahlquist opened 7 months ago
4
Adding changes for #1072 issue

#1073 ntran18 closed 7 months ago
0
Review PPI database-loading script

#1072 dondi closed 5 months ago
4
Disclaimer for lack of node-coloring PPI support

#1071 dondi opened 7 months ago
2
Export features should factor Network Mode more deeply

#1070 dondi opened 7 months ago
0
Network Mode needs to adjust more aspects of a current network

#1069 dondi opened 7 months ago
1
Node coloring does not support protein-level expression data

#1068 dondi opened 7 months ago
0
Activate Network mode at all times

#1067 dondi opened 7 months ago
2
Adjust Open File for varying network modes (GRN/PPI)

#1066 dondi opened 7 months ago
0
Add PPI demo

#1065 dondi closed 7 months ago
5