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We support a Contribution Annotation Framework that allows us to indicate roles of conributors. However, many tutorials still use the "old" style contribution metadata (without roles)
Updating this…
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Dear Developer,
Firstly, thank you for this fantastic R package. I am working with low microbial biomass samples from the nasopharynx. We are using whole metagenomic sequencing data to characterize…
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Hello,
When testing taxonomy assignment I noticed that the output would change if the order of the sequences in the sequence table was different (this apparently was due to the order in which the f…
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I'm processing our first Element AVITI 16S amplicon sequencing data, using dada2 in QIIME2. I'm wondering how to do this optimally, as it appears that it behaves a bit differently from MiSeq data in d…
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Hello, I'm running the nextflow pipeline with the command:
```
nextflow run salzmanlab/compactors \
-r main \
-latest \
-profile test,docker \
--fastq_samplesheet INPUT/samples…
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Hi @gjeunen,
I would like to extract the amplicon regions from the same database using the insilico_pcr and pga functions for a large number of primers. I tried setting up a SLURM job to do this, …
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Using https://docs.google.com/spreadsheets/d/1FFyRhI5TeUb-B4t50HRZYF_XngRt_mfAIz82UQ3geFk/edit#gid=0
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See a great example here: [https://github.com/isugifNF/blast/blob/master/main.nf](https://github.com/isugifNF/blast/blob/master/main.nf).
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Hi Dear Sir
Trust you are well
First I want to know any of the paper where I can found hiw to cute different packages used in microeco package for publications.
I mean how to cite for diversity, r…