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Issue #115 addressed the mapping counts between ontologies being reported higher than the actual counts. An issue still remains, where mappings from individual classes in an ontology to classes in oth…
mdorf updated
2 years ago
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See:
https://sourceforge.net/p/geneontology/ontology-requests/11074/
is this the right one?
```
is_a WBbt:0005766 ! Anatomy
is_a WBbt:0005738 ! body region
is_a WBbt:0005741 ! tail
po…
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proposed new child of leaf anatomy and morphology trait [TO:0000748](http://purl.obolibrary.org/obo/TO_0000748):
- Bullate Leaf + synonym: leaf blistering - Leaf with circular bumps or
blister-like up…
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The effectiveness of term templates for automated classification and alignment depends on a broader semantic infrastructure of ontologies they reference including ontologies of relations, phenotypic q…
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proposed new child of leaf anatomy and morphology trait [TO:0000748](http://purl.obolibrary.org/obo/TO_0000748):
- foliage rating - Rating of total leaf surface where: 3, small; 5,
intermediate; 7 lar…
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How are sub-ontologies within ECTO merged? Is there documentation, wiki, or an article describing this process?
Per documentation, ECTO integrates the following ontologies:
> Ontologies used in …
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When annotation extensions are comma delimited and are from GO_CC, CL and an anatomy ontology then the model should indicate GO_CCpart_ofCLpart_ofanatomy.
MGI | MGI:1336882 | acts_upstream_of_or_…
ukemi updated
4 years ago
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In FBbt we recently added a custom check to detect cyclic logical definitions, because one such loop found its way into a release (FlyBase/drosophila-anatomy-developmental-ontology#1366) without being…
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Ontologies are not well behaved in populating the obo format 'namespace' tag with meaningful, concise values (important note: obo namespaces != owl/xml namespace. See obo specs).
We should ditch the …
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Please add as a child to "tagma" http://purl.obolibrary.org/obo/UBERON_6000002
"copepod prosome"
The forward section of the copepod body containing the head. It is separated form the rear section of…