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Issue #310 will identify broken links.
Fixing this has identified that there are a few pages used in version 3 which are not required in version 3+.
- Supporting Definitions Menu
- Supporting In…
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I'm interested in using DeepBLAST for finding homologous pairs, so I need to rank alignments for a given query.
Based on #78, I built a script and a simple set for evaluating my code (I found out t…
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wget https://users.flatironinstitute.org/thamamsy/public_www/tm_vec_cath_model.ckpt
503error was reported while downloading with a similar statement
Is there a good solution?
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Within Step 6., I'm getting the following output for the following command. Are these 'No such file or directory' and 'BiopythonWarning' errors to be expected?
```
$ ./manage.py shell < tst/dbscri…
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Natalie has found an interesting cath-ssap failure on 4tp8U01 versus 2vhpU01. The program runs but generates zero scores despite the pair being very similar:
```
4tp8U01 2vhpU01 0 0 0.00 …
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If you try this : `palindrome.isPalindrome(null)` it throws java.lang.NullPointerException.
Solutions:
1. Cath the NullPointerException and return false.
2. Document.
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In Tensorflow implementation of gvp, a pretrained model is mentioned:
```
Our training pipeline uses the CATH 4.2 dataset curated by [Ingraham, et al, NeurIPS 2019](https://github.com/jingraham/ne…
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Add porta cath/mediport to the "infusionSite list.
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I've encountered this issue when running cath-align-summary on 4.3 stockholms.
Here's the command I used:
```sh
(venv) -bash-4.2$ cath-align-summary -d /data/v4_3_0.staging/003.correct_funfam_s…
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Hi,
I came from the CATH-alphaflow google colab and was trying run the whole workflow. I have a problem that when I try to wget the UniDoc url in my terminal, it says that the issued certificate wa…