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in particular,
```haskell
-- assuming n /= 0, find the index of the least significant set bit in a basis blade
lsb :: BasisCoblade m -> Int
lsb n = fromIntegral $ ix ! shiftR ((n .&. (-n)) * 0x07E…
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At present it's hard-coded to using a nucleotide model, but it could be extended to using a codon or amino-acid model.
What lines in `dbga` are most pertinent to this?
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Hi,
I have recently tested haploflow on a complex metagenomics dataset, and it seems to be performing very well compared to other tools in producing correctly assembled viral contigs. For testing, I…
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I'm looking at https://github.com/ElixirTeSS/tess-bioschemas-scraper/blob/master/src/TessApi/Material.ts#L29-L36 and noticing that we use a _lot_ of extra fields. I'm wondering if any of these are in-…
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I ended up wrapping BBHash into two crates ([bbhash-sys][0] and [bbhash][1]) because I wanted to maintain compatibility with C/C++ codebases using it. But if [rust-boomphf][2] is compatible already I …
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I reproducibly get the below error with 3.14.0 and 3.14.1:
```
0:00:41.211 85M / 6G INFO General (path_extender.hpp : 894)
Processed 150 paths from 493 (30%)…
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**Workflow Name**
Metagenome Assembly
**Project URL**
https://nmdc-edge.org/admin/project?code=brFrthQj2C3PyUvj
**Additional Info**
```
' 0:00:07.478 34M / 579M INFO General …
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We have a good number of simplistic examples and we have difficult real world examples, but it seems like we could use some controlled examples that push the boundary of what our tool can scale to.
N…
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![5-cell](https://user-images.githubusercontent.com/23307174/125021543-77466c00-e0ad-11eb-857a-ca37dd0efe33.png)
![4-cube](https://user-images.githubusercontent.com/23307174/125021556-7d3c4d00-e0ad-1…
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Hi Tan,
Sau khi git pull code ve, anh da chay tuan tu cac lenh sau :
- sudo python setup.py install
- ./configure
- ./initial.sh
Va sau do, submit lai workspace, data output 0 byte
![screen shot 20…