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Currently the complete distance matrix is computed in the hdbscan function. Is it possible that parts of it are computed and used sequentially for the mutual reachability distance such that it could b…
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**Description:**
There seems to be a potential bug in the library, specifically related to the calculations between GPU and CPU. When the values of the distance matrix are between 0 and 1, we get t…
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```
We have all the pieces in place but we don't have a method to build a distance
matrix from say a shapefile. I think for the effort required to put it
together, it'd be handy and useful for a lot…
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import numpy as np
from scipy.spatial.distance import pdist, squareform
import matplotlib.pyplot as plt
# Generate Lorenz attractor data
def lorenz(x, y, z, s=10, r=28, b=2.667):
x_dot = s*…
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The Images package has a really powerful pixel distance calculation (similar to bwdist in matlab: https://www.mathworks.com/help/images/ref/bwdist.html)... I use it all the time in my work and suspect…
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discussed in discord
Vghxv updated
2 months ago
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Hi,
I'm getting the below error, but it seems that i have a matrix. Your help would be appreciated.
```bash
Error in compute.prevalence(trait_matrix, type = "trait_matrixatgranularity3") :
…
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The edge feature suggested for NequIP as in the paper the tutorial is the distance vectors, scaled by cutoff. I intend to put more information into the edge feature, which is a second-order tensor, a …
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**Before opening an issue**
If the issue is about build errors:
- [Y] I have read [installation instructions](https://koide3.github.io/direct_visual_lidar_calibration/installation/)
- [Y] I have co…
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From my rough work, if we let the custom metric be the Gower metric, the distance matrix for all points in the dataset can be computed for both numerical and categorical data. However, it seems this i…