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BioTechCo
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Cancer prediction using DNA methylation
MIT License
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[Add] GSE243529 and tissue 450K analysis process
#82
xzh0623
opened
2 months ago
3
[Update] filter overfitting combination and overfitting threshold
#81
xzh0623
closed
2 months ago
0
Fix clustering result
#80
Vghxv
opened
2 months ago
0
Add ID columns in clustering output
#79
Vghxv
closed
2 months ago
0
Clustering
#78
Vghxv
closed
2 months ago
0
[add] ics code
#77
OuChiaYun
opened
2 months ago
0
Clustering
#76
Vghxv
closed
2 months ago
1
Distance matrix
#75
Vghxv
closed
2 months ago
0
Gse243529 data
#74
Vghxv
closed
2 months ago
0
[Add] combination validation process
#73
xzh0623
closed
2 months ago
0
[rename] move files to GDC_breast_tissue_450k_GSE243529
#72
Vghxv
closed
2 months ago
0
[Add] final combination predict process
#71
xzh0623
closed
2 months ago
0
[Remove] hyper/hypo
#70
xzh0623
closed
3 months ago
0
[update] ignore all files start with all_beta_normalized
#69
Vghxv
closed
3 months ago
0
Pick one gene between two close gene in distance matrix?
#68
Vghxv
opened
3 months ago
3
共病基因集製作
#67
OuChiaYun
opened
3 months ago
0
GO_distance_matrix.r
#66
Vghxv
closed
2 months ago
0
Clustering
#65
Vghxv
closed
2 months ago
16
[rename] stage result path
#64
OuChiaYun
closed
3 months ago
0
Rm unuse
#63
OuChiaYun
closed
3 months ago
0
Rm unuse
#62
Vghxv
closed
3 months ago
0
Rm unuse
#61
OuChiaYun
closed
3 months ago
0
Rm unuse
#60
OuChiaYun
closed
3 months ago
0
[Add] filter hyper and TSS
#59
xzh0623
closed
3 months ago
0
[Add] feature name of train and test dataset
#58
xzh0623
closed
3 months ago
2
[Refactor] folder according to file structure
#57
xzh0623
closed
3 months ago
0
[Refactor] split stage and reference age
#56
xzh0623
closed
3 months ago
1
Remove outliers for every feature rather than every samples
#55
Vghxv
closed
3 months ago
0
Process and notebook ipynb (GO_cluster/ oversampling)
#54
OuChiaYun
closed
3 months ago
0
Process and notebook ipynb (GO_cluster/ oversampling)
#53
OuChiaYun
closed
3 months ago
2
[Update] dbeta threshold
#52
xzh0623
closed
3 months ago
1
Fix typo in the pr template
#51
Vghxv
closed
3 months ago
0
Fix paths and documents
#50
Vghxv
closed
3 months ago
3
Add basic_dbeta_no_champ
#49
Vghxv
closed
3 months ago
8
Ignore dirs at any depth
#48
Vghxv
closed
3 months ago
1
Process opt0
#47
pizza6inch
closed
3 months ago
7
Process opt0
#46
pizza6inch
closed
3 months ago
1
basic process 0
#45
pizza6inch
closed
4 months ago
0
Simulated annealing
#44
OuChiaYun
closed
4 months ago
0
Process ipynb
#43
OuChiaYun
closed
3 months ago
1
Update link of GDC data Portal to v2 in Notion
#42
Vghxv
opened
4 months ago
0
Set dbeta threshold
#41
xzh0623
closed
3 months ago
1
Basic dbeta
#40
Vghxv
closed
4 months ago
0
Establish a standardilzed process
#39
Vghxv
closed
2 months ago
1
Use poetry to manage environment
#38
Vghxv
closed
4 months ago
1
add PR template
#37
Vghxv
closed
4 months ago
0
setup poetry built env
#36
Vghxv
closed
4 months ago
0
add PR template
#35
Vghxv
closed
4 months ago
1
Remove outdated file
#34
Vghxv
closed
3 months ago
0
Hyper regulation
#33
xzh0623
closed
3 months ago
1
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