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### Checks
- [X] I have checked that this issue has not already been reported.
- [X] I have confirmed this bug exists on the [latest version](https://pypi.org/project/polars/) of Polars.
### Re…
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Creating this ticket to begin collecting requirements and considerations for modeling "Genetic Conditions". This is the name we have given to the concept of "A disease or set of one or more co-occur…
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Hello,
I am using treeomics and find it is stunningly fast. I have a couple of questions regarding features and execution
1. Is there a default threshold for considering a variant to be present? For…
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We have methods for associating individual genetic variants and phenotypes (https://github.com/pystatgen/sgkit/pull/16, https://github.com/pystatgen/sgkit/pull/66), but inferring associations with gen…
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Also @pontikos,
We seems to be using a number of ways to connect to the neo4j from python:
So What's the right way to connect to neo4j - should we be using py2neo?
- https://github.com/phenop…
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collecting references and annotations --
1. [VarCover: Allele Min-Set Cover Software](https://www.sciencedirect.com/science/article/abs/pii/S1525157819304143)
>To facilitate reference-material s…
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Dear Ha X. Dang,
Hello, I am trying to analyze clonal evolution using PyClone and ClonEvol.
I have two WES samples from one patient.
When I followed the manual, I could not infer clonal model…
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Sexperience 1.5.1.5 removed the _GatheredCum_ if Cumpilation is loaded.
In the code I reference it expliclitly, which leads to a crash.
Error:
```
Exception in JobDriver tick for pawn sex sla…
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Testing `HARTWIG` and `TCGA` with Oncodrive3D release 0.1 and the optimized version of the combination (with LHS)
using scratch option for Oncodrive3D