-
the `
-
Hi,
Thank you for making Whatshap available.
I am studying a gene duplication in a family of diploid species, and I was wondering if I could use whatshap to determine how many copies of the gene…
-
In reference to this piece: Reference: https://github.com/pparsons/angular-chromosome-vis/
http://pparsons.github.io/angular-chromosome-vis/
- [x] get to work on the page as-is
- [x] add ceontromere…
-
http://rseqc.sourceforge.net/
http://kazumaxneo.hatenablog.com/entry/2018/02/27/235531
multiqcでも表示できそう
https://multiqc.info/docs/
Supported scripts:
- bam_stat
- gene_body_coverage
- infer_…
-
Dear Dr. Lind,
I'm generating a custom eukdetect db and I'm stucked at get_uncomputed_taxid_per_busco.py. It fails with the following message:
"""
python /home/qi47rin/proj/00-git/EukD…
-
The WHALE looks like a great tool for studing WGD and evolution of gene duplication and loss rates. However, it is hard to install whaleprep for me. So, could you give me same advises?
Should I insta…
-
In the new burden evidence, 40 evidence are falling to invalid because of duplication.
## Background
The current fields that identify a burden evidence as unique are: the target, the disease, th…
-
the following sequence variant types need to be mapped to SO:
+-----------------------------+
| description |
+-----------------------------+
| Conversion |
| Deleti…
-
Need a way to do compound het/homozygous filtering that would identify genes for which the two variants in question are an overlapping CNV and a SNV/indel. Perhaps inputting CNVs using a BED+ file?
A…
-
**Question from an AnnotSV user:**
I am writing to you because we have annotated our SV tables with AnnotSV and we are not sure of in which case you consider that a benign inversion completely over…