issues
search
allind
/
EukDetect
MIT License
39
stars
15
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
invalid escape sequence '\d' on get_uncomputed_taxid_per_busco
#50
ailtonpcf
opened
1 week ago
1
eukdetect-db failing at bedtools getfasta
#49
ailtonpcf
opened
1 month ago
0
How do you classify the fasta genome
#48
qkqk-hub
closed
2 months ago
1
Error in config file
#47
arfaiq
closed
5 months ago
2
Fastq PAIRED Doubt
#46
sarpiens
closed
6 months ago
1
errors in test_eukdetect.py
#45
tiantianlili
closed
8 months ago
0
Error installing EukDetect
#44
ilarioferrocino
opened
12 months ago
3
finding installation folder on a cluster
#43
iholmes
closed
12 months ago
1
Update Database
#42
termithorbor
opened
1 year ago
4
Error: missing files in database directory: all_buscos_v4.fna.1.bt2, all_buscos_v4.fna.2.bt2, all_buscos_v4.fna.3.bt2, all_buscos_v4.fna.4.bt2, all_buscos_v4.fna.rev.1.bt2, all_buscos_v4.fna.rev.2.bt2
#41
t-doggg
closed
1 year ago
1
ModuleNotFoundError: No module named 'datrie'
#40
fuesseler
opened
1 year ago
1
Empty read count file. Likely no aligned reads in sample
#39
Liuyuxinn
closed
1 year ago
1
Meta-analysis with EukDetect and some questions
#38
sarpiens
opened
1 year ago
7
convert bam for fastq before running EukDetect
#37
MjelleLab
opened
1 year ago
0
Two questions that need help
#36
haihao999
closed
1 year ago
1
Unable to Install eukdetect
#35
marynjerey
closed
1 year ago
10
Unable uncompress 12670856 when I download EukDetect
#34
Liuyuxinn
opened
1 year ago
0
Unable download EukDetect database from Figshare
#33
Liuyuxinn
opened
1 year ago
10
Error in `filter` mode
#32
shibataryohei
closed
1 year ago
2
Test Fail (Error: could not locate database directory.\n)
#31
erfanshekarriz
closed
1 year ago
2
FileNotFoundError: [Errno 2] No such file or directory: \'snakemake\'\n'
#30
shibataryohei
closed
1 year ago
26
How to calculate the abundance of eukaryotic and prokaryotic microorganisms in the same sample
#29
alienn233
closed
1 year ago
3
EukDetect recent database
#28
magibc
closed
1 year ago
2
Samples with uneven read length
#27
ChanyeongKim
closed
2 years ago
1
Combining results from multiple samples
#26
rishibhandari63
closed
2 years ago
1
Relative abundance inference from coverage data
#25
mhyleung
closed
2 years ago
11
Errors when trying to run env update
#24
Githubphilia
opened
2 years ago
1
unable to install eukdetect
#23
saras224
opened
2 years ago
8
Is this package still being maintained and/or supported?
#22
antgonza
closed
2 years ago
2
Dude, Where's My Taxonomy?
#21
antgonza
closed
2 years ago
3
No package metadata was found for EukDetect
#20
justinshaffer
closed
2 years ago
2
ZeroDivisionError: division by zero
#19
antgonza
opened
2 years ago
3
"Four reads in two markers" rule for paired end reads?
#18
wbazant
closed
2 years ago
2
files with different read lenght
#17
ailtonpcf
opened
2 years ago
1
necessary to filter bac or host at the beginning?
#16
ifanlyn95
closed
2 years ago
3
error estimating library size for single reads?
#15
SethCommichaux
closed
3 years ago
3
Error not allowing for analysis of single reads (not paired end)
#14
SethCommichaux
closed
3 years ago
4
eukdetect test fails at aln stage
#13
emilyvansyoc
opened
3 years ago
13
--unlock argument.
#12
HNUmcc
opened
3 years ago
4
relative abundance
#11
ann-sophiek
closed
3 years ago
1
A error in Ubuntu running by conda
#10
hannet91
closed
3 years ago
3
AttributeError: 'str' object has no attribute 'keys'
#9
LuzBreton
closed
3 years ago
6
Cannot find package: libgfortran-ng==7.5.0=hdf63c60_6
#8
ginaguzzo
closed
3 years ago
1
minimum read length recommended ?
#7
colindaven
closed
3 years ago
1
Unicode error
#6
hyphaltip
opened
3 years ago
5
kz dependency
#5
nick-youngblut
closed
3 years ago
4
add to bioconda
#4
nick-youngblut
opened
3 years ago
1
using snakemake directly
#3
nick-youngblut
closed
3 years ago
2
Error: output files exist in output directory
#2
zhaoc1
closed
3 years ago
1
Update README.md
#1
zhaoc1
closed
3 years ago
0
Next