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I am going through your great tutorial about cox proportional hazards mordel. I've found a very useful tool for visualizing the estimated survival curves that are based on the hazard estimates and ba…
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@nspope sent me this, which is a good core for a new tutorial on cross coalescence rates. Probably worth waiting until some of the core functionality (e.g. `rates_from_ecdf`) is implemented in _tskit_…
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Hi and sorry for the long post in advance,
According to the documentation, this function plots the effect of a covariate on the observer's survival. I do understand that the CoxPH model assumes tha…
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Create KM plot for outlier gene groups and other clinical variable groups
- [x] Include the risk table and log-rank test results
- [x] Document the statistical methods used
- [x] Use overall surviv…
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The current implementation only supports difference between observed survival and predicted mean, which ignores censoring, so is of limited use. The `survival` package seems to do something more con…
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mainly an idea while thinking of k-sample goodness of fit tests and plots:
can we plot several data series on the same qq or pp plot?
one application would be if we have several series, by category …
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This is also used to look for selection. See also #1314 - maybe this is related, as each coalescence is the end of a linage.
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https://github.com/bwlewis/duckdb_and_r/blob/d4de43f682719fae54274887d7d01993f53c3e4c/tpch/tpch.rmd#L111-L112
I think this is very much true. I have an example [here](https://github.com/iangow/note…
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### Feature description
When using the Kaplan Meier plots [tm_g_km](https://insightsengineering.github.io/teal.modules.clinical/main/reference/tm_g_km.html).
There is no link between the colors in…
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e-mail from a user
Hi Alboukadel,
How are you? I hope you’re doing good. I was trying to save a KM plot using survminer. However, when I try to save the figure with ggsave I got an error message a…