-
### What is the problem this feature will solve?
I am using Astropy models in MCMC and this would be a useful feature. For example, if I am running an MCMC with my model being two gaussians. The post…
-
I tried an emcee simulation in my laptop and is getting this unusual error. Is it due to version incompatibility?
>>> %Run MULT_FREQ_updated.py
FREQUENCY: 28
Traceback (most recent call last):
…
-
The `model.idata.attrs` is a serialized format of the model which could be used or exposed better. For instance,
- Load functionality can be expose to support configuration file initialization
- …
-
` File "/Users/jkubica/h/superphot-plus/src/superphot_plus/fit_numpyro.py", line 328, in run_mcmc
res = mcmc.run( # pylint: disable=unused-variable
File "/Users/jkubica/opt/anaconda3/envs/sup…
-
@dominicrufa and I were trying to run repex on the endstates of a capped amino acid transformation (ALA->THR) (using the new [RepartitionedHybridTopologyFactory in perses](https://github.com/choderal…
-
I should implement MultiNest (specifically [PyMultiNest](https://github.com/JohannesBuchner/PyMultiNest)) as nested sampling typically converges more quickly than MCMC and can handle multi-modal poste…
-
Hello,
I have been using the minimize function in ReplicaExchangeSampler to minimize a set of replicas in different alchemical states like this:
_lsd_move = openmmtools.mcmc.LangevinSplittingDyn…
-
For consideration to add: [JAGS (Just another Gibbs sampler)](http://mcmc-jags.sourceforge.net/) — Cross-platform program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (M…
-
Today @oschulz showed me this code:
https://github.com/bat/BAT.jl/blob/master/src/rngs/rng_init.jl
He suggested this could be split into a new package. If this happens, we should consider switchin…
-
Greetings!
I've ported a subset of emcee functionality to the [NumPyro](https://github.com/pyro-ppl/numpyro) project under the sampler name [AIES](https://num.pyro.ai/en/latest/mcmc.html#numpyro.i…