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This is an request from the cneuromod team.
Currently we are using the MNI template to access overlap of grey matter with atlas, but it would be useful to extend this to subject native space
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Hi,
I am working on macOS Catalina 10.15.7 and I have downloaded the minc-toolkit-v2 (1.9.18) and all the models from http://bic-mni.github.io/. When I run the mritotal command, I keep getting the…
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~~~
/MS088_R01_20 $ fslhd lesion_merged.nii.gz
filename lesion_merged.nii.gz
size of header 348
data_type UINT16
dim0 3
dim1 141
dim2 141
dim3 1100
~~~
MNI-Poly-AMU from SCT v3.0.1 (h…
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Dear Frank
This is Yihe from UCL, How’s everything? I hope this message finds you all good!
I have a question on DSI autotrack module. Assuming that I have got a tract of nii format in MNI space…
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I'm using the AAL template and MNI atlas available from ANTsR:
`mymni
ptsii updated
2 years ago
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## Summary
We were trying to use the `mrtrix_multishell_msmt_pyafq_tractometry` recon specification on our local computing cluster and we are getting network connection errors (see below). The comput…
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http://onlinelibrary.wiley.com/doi/10.1002/hbm.23737/full
Supersedes #253, and may make ultimately replace SyN-based susceptibility distortion correction (#496/#544).
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Hi Keith,
Bruce and I noticed that standard MNI images (1 and 2mm) are not loading correctly in AFNI. The sign on y co-ordinate is flipped such that actual posterior parts of the brain is indexed a…
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I have added the BIDSifed data for the mni-bmpd data along (contains both images and segmentations). It is in the branch **rb/initial-data**
@mguaypaq Can you please review this?
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### Describe the bug
Both of these templates ([`mni_icbm152_t1_tal_nlin_asym_09c.nii` packaged in C-PAC](https://github.com/FCP-INDI/C-PAC/blob/develop/CPAC/resources/templates/mni_icbm152_t1_tal_n…