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Hello, when I run create_SCENICPLUS_object, I get the following error, how should I solve this problem
code:
```python
> from scenicplus.scenicplus_class import create_SCENICPLUS_object
> import…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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Hi, I conducted the motif enrichment analysis by HOMER findMotifsGenome.pl. Then I try to get the location where the motif is enriched by following the command (http://homer.ucsd.edu/homer/ngs/peakMot…
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Hi @All,
Just like #364 question about the peak differential analysis.
I want to study the differential region between treat and control, however i am unable to locate the function that ma…
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- [x] Peak calling
- [x] Read counts
- [x] Differential chromatin accessibility analysis: try csaw and DeSeq2
- [x] Functional enrichment analysis
- [x] s-LDSC
- [x] Motif enrichment analysis
- […
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Check to see if there is some sort of open-source R solution to doing an IceLogo-like motif analysis.
It would be beneficial to make this work off of quantified values. Currently, the method just …
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2017.3.24 上午
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基因组
2017.3.24
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1.什么样的物种适合全基因组测序？
能被高引用的，才可能高分文章。
天山雪莲，从稀有、中药角度，老外估计不喜欢。
如果有天山雪莲的体外培养系统，做成耐寒的模式生物，则有可能发高分。
end9:45
2.技术流、思路哪个重要…
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I performed the motif enrichment analysis and motif deviation analysis following the codes written in Chapter12 and 13.
Motifs whose accessibility was enriched in each cluster were successfully deter…
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https://mp.weixin.qq.com/s/aFJVwWq9agaOVrt4hyKSKw
ixxmu updated
1 month ago
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I am importing data from deeptools compute matrix. The import works fine but i get error while doing clustering.
My data does not not seems to have NA
compute matrix cmd
computeMatrix reference…