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**Is your feature request related to a problem? Please describe.**
Something that came up when getting ready for ESA is that some geo_loc_names use a country or state name written out and some use an…
aclum updated
12 months ago
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currently ENA dev is using BioSamples dev
- [x] provision vms
- [x] ticket in [RUP](https://www.ebi.ac.uk/tsi/rup/): [755531](https://helpdesk.ebi.ac.uk/Ticket/Display.html?id=755531)
- [x] se…
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A key part of the schema is the allocation of different metadata elements to different environmental
packages (e.g., ‘depth’ is a required metadata element for soil and sediment samples, and conversel…
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Possible alternative to #780
@pkalita-lbl @mcovalt what do you think of auto-populating some DH columns?
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**Current term details**
```
Term name - nose/mouth/teeth/throat disorder
Term ID - MIXS:0000283
Structured comment name - nose_mouth_teeth_throat_disord
Definition - History of nose/mouth/teeth…
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How to run in a mode that ignores Permissible value standard_naming?
```shell
linkml-lint src/schema/nmdc.yaml | grep -v 'Permissible value of Enum.*(standard_naming)'
```
I think we can ign…
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**Current term details**
Please supply the current details of the term that you would like to update:
```
Term name: "size_frac_low" AND "size_frac_up"
Term ID: "MIXS:0000735" AND "MIXS:0000736"
…
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**Dataset/group this task is for:**
Oliver Stegle's group
DopaminergicNeuronDifferentiation
Latest sheet: https://docs.google.com/spreadsheets/d/1Eblt1hHBAwk84BFiuTzbANGcJUYdtj5k/edit#gid=56358489
Fo…
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Determine which ontologies to use for transcriptomics data (meta data templates)
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Hello,
I have several questions regarding the ri, as my queries don't behave as I would expect them to.
1. Is there a way in beacon2-ri to specify the reference sequence name as specified in th…