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[close if we think this is not Uberon's responsibility]
It's good that Allen are producing the OWL themselves. I wish that they provided a central source of truth with table of downloads
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@Pepe-Marquez mentioned using the https://matportal.org/ontologies/TFSCO
we can perhaps use the simple prompting-based approach from https://github.com/rahulnyk/graph_maker
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https://www.ebi.ac.uk/ols4/ontologies/ordo
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Some Code Lists could be linked to external ontologies such as UNCEFACT public vocabulary.
See: https://vocabulary.uncefact.org/ and https://vocabulary.uncefact.org/PartyRoleCodeList for an example.
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Create a widget that combines the HierarchyWidget and GraphViewWidget into one widget. It should reuse both widgets so that we don't get code duplication!
Add a tab feature (optional) to show clas…
jusa3 updated
14 hours ago
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**Describe the bug**
If you type "phenological scales of olive tree" then press enter in the search box which is on the home page, the results do not include the ontologies that match this string.
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j'ai utilise la commande suivante
python XML2RDF.py --output output --format ttl C:/Users/cami/Downloads/FZK-HausUTM.gml citygml_3_mappings.json https://dataset-dl.liris.cnrs.fr/rdf-owl-urban-data-…
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Hi,
I was exploring the Cell Type Ontology through the OLS website, so I searched "B Cell" and obtained this entry:
https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%3A%2F%2Fpurl.obolibrary.o…
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Per **November 13 2024** call with @ambrosejcarr, @jahilton, @BAevermann, @SESDNA :
1. CELLxGENE schema will continue to use taxon specific development stage ontologies when available; otherwise, w…
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Currently we have an OntologyManager (`packages/jbrowse-plugin-apollo/src/OntologyManager`) that loads ontologies and allows things like the feature type autocomplete to use correct values for the ont…