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**Not a bug, I just didn't see a format that looked right**
There are a WHOLE bunch of 3CLpro (Mpro, Main Protease, nsp5) structures. And potentially a WHOLE BUNCH of molecules that will target it. I…
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Hello,
My question is in the title. Here are more details:
I generated a spectral library with Fragpipe using unspecific digestion (immunopeptidomics data). I then would like to match this librar…
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At the moment MI:0524 term is defined as:
Name: calmodulin binding peptide plus protein a tag
Definition: Tag encoding a calmodulin binding peptide, a TEV cleavage site, and the Staphylococcus aureus…
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This is mostly to make the terms more generic by decoupling MS methods from any specific molecule type and by decoupling mudpit from any specific chromatography and/or any specific MS/MS technology. P…
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Dear DIANN Developers,
Thank you very much for developing and providing support for DIA-NN. It is an invaluable tool in our group!
I have a question for some samples which were digested with both …
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Can you explain what this means?
"We split DUD-E into three folds based on target classes to perform the cross-class CV study. There are 26 kinases in the first fold, 31 targets in the second fold …
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Getting an error on the following step, any help would be appreciated!
```
[66/af4c33] process > GAP:PROCESS_SINGLETON_GENOMES:PROKKA (MGYG000000010) [ 42%] 3 of 7, failed: 1
```
Error:
```
…
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Hi,
Thank you so much for sharing all the datasets of your publication: Multi-omics analyses of the ulcerative colitis gut microbiome link Bacteroides vulgatus proteases with disease severity! That …
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If there are substitutions near an insertion, bowtie2 can get confused about where exactly to put the insertion. Use the same technique as Recall to move the insertions to expected locations. Here's C…
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I think it would be nice to have a button at the top of each task that would open a dialog, which would ask the user a series of questions and then depending on the answers, recommend search settings.…