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Hello,
Thank you for posting your code - nice work!
I have installed and tested, with success, a few of the sample pocket pdbs.
When trying to generate my own pocket pdb files, I run into the follo…
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GO:0045053 protein retention in Golgi apparatus
Biological Process
Definition
The retention of proteins within the Golgi apparatus. Golgi-localized carbohydrate-modifying enzymes have a short N…
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We have two processes that need to communicate
- Motion happening in https://github.com/subroutines/djhbrm/blob/master/dolfin_code/particle_diffusion_on_mesh.py
- Actin Network movements happening in …
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Title: Function of HAb18G/CD147 in Invasion of Host Cells by Severe Acute Respiratory Syndrome Coronavirus
# General Information
## Please paste a link to the paper or a citation here:
Link…
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When calculating `get_z_surface` undefined values in bins inside the embedded element (i.e. protein) may arise since no `z` coordinates populate bins in the grid. Such undefined values spread in the a…
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decreased protein localization to cell surface
decreased protein localization to cell surface with increased localization to endosomal structures
decreased protein localization to cell surface, misl…
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Example: Gastric emptying time
![image](https://github.com/Open-Systems-Pharmacology/PK-Sim/assets/1041237/ba436dfa-29cb-4bb7-b99c-c2367801e58e)
and
![image](https://github.com/Open-Systems-P…
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Stemming from the discussion in https://github.com/geneontology/go-annotation/issues/1621
@ValWood kindly offered to propose an improved definition for 'cell surface'. A suggestion is to rename to 'e…
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Hi!
Is there any chance to draw ribbon-like lines with ipyvolume? Just because with ipyvolume, I am able to draw nice surfaces with a line (the protein backbone), but I would like to make this line…
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Please provide as much information as you can:
* **Suggested term label:**
phospholipase C-activating N-formyl peptide-activated signaling pathway
* **Definition (free text)**
A phospholipase…