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According to the validation rule 10807, the location object's sequence properties should point subComponent.instanceOf.Sequence rather than via the parent component that contains SubComponent. Can we …
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There is an inconsistency in how different versions of rdflib handle namespace prefixes that cause the prov ontology to be given a the `default1` prefix instead of `prov`. This causes an issue for UM…
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Add relevant tags including:
- [ ] SBOL visual
- [ ] SBOL 1
- [ ] SBOL 2
- [ ] SBOL 3
- [ ] SBOL 1 import
- [ ] SBOL 1 export
- [ ] SBOL 2 import
- [ ] SBOL 2 export
- [ ] SBOL 3 import
- …
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### Background
Using Excel templates to encode SBOL data has been useful in a number of projects. Unfortunately, there is currently a fork between the SBOL 2 version of the library (https://github.co…
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### Background
[dnaplotlib](https://github.com/VoigtLab/dnaplotlib) is software to visualize genetic designs using SBOL Visual. It does not yet support SBOL3 or SBOL Visual 3.
### Goal
This proje…
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There are 5 PROV-O terms that should be supported for SBOL in iBioSim:
1. Activity
2. Association
3. Usage
4. Plan
5. Agent
Refer to SBOL[ specification 2.1.0](http://sbolstandard.org/wp-conte…
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Suggestion to add a `@extension' pragma or similar, that will hook into a custom written extension to do some processing of RDF triples.
Eg:
```
Identified(name, type) =>
sbol.displayId = name…
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Related to https://github.com/SynBioDex/SBOL-utilities/issues/248
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In registryInputDialog.java, check uri being fetch to see if it is in the selected synbiohub, if not create a synbiohub frontend where it is located based on its uri prefix, using registry preferences…
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Hi, how do you set the qualifiedUsages of an Activity properly?
The following piece of code does not serialize the usages of the Activity:
```
document = Document()
original_cd = C…