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For one reason or another, I always thought that `Seq.except` takes a sequence and removes all elements from it that are in the `itemsToExclude` sequence. The tooltip says this:
> Returns a new seq…
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First, thanks so much for this fantastic tool
I was analyzing a collection of plasmids from pseudomonads, and came across predictions of relaxases that were unexpected, because I got a prediction w…
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```
Parameters: -genome Zlat.fasta -intact Zlat.fasta.pass.list -all Zlat.fasta.out
-t 60 -q -blast /public/home/cszx_huangxh/biosoftwares/Anaconda3_8/envs/gene_ann
o/bin/
2024年 08月 26日 星期一 21:25…
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I am running the following FASTA file
[fasta.zip](https://github.com/BioinformaticsToolsmith/Identity/files/12022172/fasta.zip)
Using `../meshclust -d file.fasta -o file.txt`
```
MeShClust 2.…
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Synteny "tracks" are different types of thing from annotation tracks - they are defined on 2 sequences not one - it's like the difference between a vector and a matrix. It's confusing having three "tr…
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Expanding the metaproteomics workflow
There are two limitations of the current metaproteomics workflow that limit its utility for the community,
(i) peptide sequence identification currently requires …
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The current implementation of the analysis tool using Needleman-Wunsch algorithm is highlighting the contour between two chants. These mismatches and gaps are made of two notes, and in order to highli…
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```javascript
new webpack.optimize.UglifyJsPlugin({
compress: {
warnings: false,
screw_ie8: true,
conditionals: true,
unused: true,
comparisons…
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The `pytest.approx` function can be used for scalar comparison, but also for sequences, dicts, and since version 3.2.0 also for Numpy arrays.
What it doesn't handle is nested sequences, so we can't r…
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The Align Sequences button in the Sequence Data Tool cuts bp off of the end of some sequences in the alignment, and shifts reading frame by inserting gaps:
This does not happen with every dataset I…