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Why do we need to execute 'convert mouse gene identifiers to human ones that match data in GWAS summary data'? I don't quite understand. Are GWAS sources different from single-cell data sources?
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Hello,
I have a rangewide sample of 115 bats in the US. I'm running gone on populations defined in the PCA. Northern populations have run correctly. Here is an example output from a northern group…
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Hello
Is there any reason why ```sep2=''``` is not allowed in ```fwrite```?
Several R packages are used to manipulate genomic data (such as SNP) and do a good job filtering out those with bad q…
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Allow users to run get_SNP_data outside of lin_loc and have the list produce by get_SNP_data as input of lin_loc.
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Add support for writing a selection of SNP call data to a plink binary format file. Useful to export data for analysis with tools like ADMIXTURE.
Prototype implementation [here](https://colab.resea…
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Hi there,
I am running mtCOJO analysis using Alzheimer's Disease while conditioning on Small Vessel Disease. I am using LD reference from 1000 Genome reference for EUR population and LD scores and…
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Hi!
I was running RAiSD analysis with maize 600k SNP array (572 lines) data prunned using a 50 SNP window, 5 bp step size and VIF = 2 in Plink 1.9. SNPs were prunned according to the results of [Malo…
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Prompting for non-conformable arguments when using MRAPSS::est_paras.
Are the matrices multiplied in the correct dimension and order?
here is the code and output to repeat the problem.
```{r}…
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# RFC: Hybrid Node Attestor
## Abstract
This document defines an implementation of a hybrid node attestor for SPIRE. It aims to allow the combination of different built-in and external node atte…
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## Describe the bug (required)
It seems this bug has been described and fixed previously in 0.5.10 (#235, #264), but I'm finding the same issue with v0.6.2
mv_extract_exposures_local() returns "Erro…