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the SVS requires a fully airgapped machine, preferably a laptop to avoid the use of peripherals. Laptops with removable networking cards are becoming rarer, so we should identify viable candidates and…
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I have a question on downloading TCGA data. I used the gdc command line tool to download the WSIs for BRCA. However, a significant number of svs files did not download correctly, resulting in a lot of…
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![image](https://github.com/openseadragon/openseadragon/assets/16040615/35b05439-bdf2-45f7-a315-9923937fa2ec)
This is a part of whole slide image in svs format. Only parts of this slide was selec…
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Right,
As with all good problem posts lets start with the system it is running on this is my personal laptop and it's an air because when I bought it it was just for sending invoices, reading emails…
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Thanks for making this software available. I'm getting an error that might trace down to node-iiif, or perhaps something wrong in my url syntax. Basically, this url in a test iiif server we set setup …
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Hello! Thanks for your great work. I tried to run SVS Muskit inference both from original repo and espnet but still have no clue what to do with all that code. Could you please explain how I can run E…
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Hi again
I am a newbie. I have modbam files from ONT that I try to call SVs on but I have `Segmentation fault: 11` error. Do you have an idea of what it could be? Also it does not indicate the avg …
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Hi,
Where can I find documentation to generate SVS voices?
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Hi, there. In TIDDIT 's output VCFs, there are lots of BND type SVs, which both breakpoints on the same chromosome. What does this mean? Should I be possible to interpret those same-chr-breakpoints a…
Knnnk updated
3 months ago