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Hi, this is what I obtained by downloading your merged bams and doing
`samtools consensus -m bayesian --use-qual --call-fract 0.75 -a --min-depth 10 bamfile.bam -o seq.fasta --show-del yes --sho…
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not properly calculated.
Need to remove 2 outputs from 2 workflows before creating v2.1.0 release
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Several verbiage edits need to be made to the Portal
(1) At bottom of homepage (https://virusseq-dataportal.ca/), box about COVID Cloud should be updated to:
"Genome Canada has partnered with DN…
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v4 hasn't been released just yet, but would be good to have a task ready to go when the time comes
will require:
* a new WDL task
* updates to all WDL workflows that call the `pangolin4` task…
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(1) I downloaded the workflow files locally with
```
wget https://github.com/broadinstitute/viral-pipelines/archive/v2.1.0.2.tar.gz
```
(2) I ran fastq_to_ubam with the provided test data:
…
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# Open Grant Proposal
**Name of Project:** `EDEN: The Ethical Data Exchange Network`
**Proposal Category:** `integration-adoption`
**Proposer:** `flaxscrip & team (listed below)`
**(Optio…
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**Submitting author:** @wrightaprilm (April Wright)
**Repository:** https://github.com/wrightaprilm/treesiftr
**Version:** v1.0.0
**Editor:** @juanklopper
**Reviewer:** @ethanwhite, @rachelss
**Archiv…
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First encountered by @sidneymbell (so impacting actual users)
If you update Nextclade to v1.10.0 and run nextclade without the `--input-dataset` flag (which worked in the past) and don't explicitly…
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### 路由地址
```routes
/research/nature
```
### 完整路由地址
```fullroutes
https://rsshub.app/nature/research/nature
```
### 相关文档
https://rsshub.app/nature/research/nature
### 预期是什么?
正常抓取内容
### 实际发生了什…
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The current default value for seq_method is not an allowed value in the controlled vocabulary for that field and should be switched to "ILLUMINA"