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In the document `docs/miairr/introduction_miairr.rst`, there's a link to the Minimal Standards Working Group (`http://airr-community.org/working_groups/minimal_standards`). However, this page is curre…
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I have targeted DNA sequencing for a tumour and I do not have any normal samples (matched or even non matched)
I am trying this but I get error
```
Rscript /R/x86_64-pc-linux-gnu-library/4.4/P…
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### Description of bug
Hi!
I am assembly soil samples, there has some samples , i try to set different params for example different memory or threads, but still not solving.
best,
wanli
### s…
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When I try to load collections from my endpoint with the plugin I get the following error:
>Populating data query attributes failed due to the following error:
>list indices must be integers or sl…
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Hi @wstolte,
Here some issues Im finding in the file with the final product. Writing here for documentation.
Notice how the values of the variables present some aberrations.
e.g. I would not e…
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This attempted WGS/UTM conversion tends to throw a lot of errors:
https://github.com/LBNL-UCB-STI/beam/blob/8a428b9e72f6c68e2f4832f4a305ff32e0248437/src/main/scala/beam/utils/scenario/UrbanSimScena…
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**Describe the issue**
I am analyzing whole genome sequencing(WGS) data in rice(Oryza.sativa) plants. When I use the following command to create the rice database, I encounter this problem. It should…
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Issue #13736 called out non-determinism in contact results that was leading simulations that should deterministically proceed along the same trajectory to diverge (with #13737 addressing that issue). …
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Numbat has [Using Existing CNV Calls](https://kharchenkolab.github.io/numbat/articles/numbat.html#using-existing-cnv-calls) for borrowing information from sample-matched whole genome sequencing. Such …
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This goes back to a suggestion by Mike Ownsworth:
Since it cannot be excluded that a user uses his keys across multiple protocols, we should introduce domain separation for signatures. This can be…