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If you run the advanced tutorial copy and paste style you get:
```
[Engine Exception]
---------------------------------------------------------------------------IndexError …
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The return data structure is taking too long to assemble, specially if we have to use a mixed-type list like Rcpp list, which is super inefficient.
I believe that if we return only one line per event,…
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Hi IUC members,
we will have the chance to present the IUC at the upcoming GCC 2016 conference.
This is the accepted abstract:
```
Galaxy provides abstractions to make it easy to integrate tools, so…
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The Broken-stick is a continuous distribution but the quantile function returns NaN if we use non integer N:
``` r
> y qbs(y, N=1000, S=100)
[1] 1.066649 2.260756 3.608093 5.152799 6.978123 9.…
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@joeyklee ,
I've put the final data set up on the dropbox folder.
There are quite a few files, but I think the key one you are using right now is the BEC10centroid_Normal_1971_2000MSY.csv.
The oth…
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When I run GBSX demultiplexer with the example data, the tool works correctly. But when I launch the tool with my data I get the following error:
---
Start the demultiplexing.
USE DUAL BARCODING: fa…
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It would be useful to have information regarding genotype quality and read depth for each sample in the VCF file, which is already provided in the Stacks output but not in pyRAD's.
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Katherine plans to have libraries ready for sequencing Nov 22.
There will be 4 samples, and we plan to do one lane of each. Each sample has 96 barcodes.
Length is only 36 bp, so **50bp SE** is what…
sr320 updated
8 years ago
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Hi,
I am running pyrad on a grand total of 6 samples, and it has been running for almost 2 weeks with little to show for. Specifically I am running it on a HPC cluster with this bash shell:
# !/bin/…
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### Summary
- What does this package do? (explain in 50 words or less):
It makes it easy to convert between plate-shaped data and tidy data. [Plates](https://www.google.com/search?q=microtiter+pla…