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## Feature Request
### Desired behaviour
OICR will have a small Kubernetes cluster. Give https://github.com/EMBL-EBI-TSI/TESK and Cromwell TES a try https://cromwell.readthedocs.io/en/develop/backe…
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See https://gitlab.com/i5k_Workspace/workspace_roadmap/-/wikis/Adding-an-organism-CWL-update for full description of each task (requires gitlab login)
- assembly accession number: GCF_019457755.1
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See this suggestion by @wm75: https://github.com/galaxyproject/iwc/issues/96
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But not the normally run CWL conformance tests
Failed twice:
https://ucsc-ci.com/databiosphere/toil/-/jobs/1159#L907
https://ucsc-ci.com/databiosphere/toil/-/jobs/1102#L907
Anything thoughts @adamno…
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Currently one gets a error as the expected outputs are not available, which is technically true but unhelpful.
- [ ] Add helpful error message for [return code 139](https://stackoverflow.com/questi…
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Requires updating `cwltool` version. Let me know how I can assist!
Related is https://github.com/dockstore/dockstore/issues/2371 but this issue can track CWL v1.1 separately
┆Issue is synchronized w…
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### Environment
- TeXstudio: 4.0.2
- Qt: 6.2.0
- OS: MacOS (both Big Sur and Monterey)
- TeX distribution: MacTeX (TeX Live)
### Expected behavior
When I use the `\includestandalone` macro…
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Right now it appears that the Downstream plugin doesn't output a predicted downstream sequence for `stop_lost` variants (or it is just a sequence of multiple `X`s). Is this the expected behavior? Woul…
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## Bug Report
### Expected behaviour
Launch instructions with cwltool should just work
https://dockstore.org/workflows/github.com/dockstore-testing/md5sum-checker:develop?tab=launch
### Actual be…
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If I have a nextflow workflow with no description, I get the following message:
> No description associated with this workflow. See Dockstore's Getting Started With CWL and commonwl.org for how to de…