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As team lead for RNA (Liz E) it is very hard for the lab team, when making pools, to determine the correct label to put on the tube as the whole name doesn’t fit on the tube.
LCMB custom pool and LCM…
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When I ran irGSEA.integrate, I got an error.
```
object = JoinLayers(object)
object@assays$RNA$data = as(object = object@assays$RNA$data, Class = "dgCMatrix")
object@assays$RNA$scale.data = as…
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There are several ncRNA terms that refer to specific RNA families and mirror the [Rfam](https://rfam.org) RNA family classification, for example:
- [OxyS_RNA](http://sequenceontology.org/browser/cu…
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After successfully installing RF2NA in my linux workstation, I tried to run these commands
```
# run Protein/RNA prediction
../run_RF2NA.sh rna_pred rna_binding_protein.fa R:RNA.fa
# run Protein…
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`Modality` right now only supports a very limited number of cases. It would be helpful to have biomolecules beyond proteins, starting with nucleic acids.
### Describe the solution you'd like
Add…
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Summary of request: Add a new organization to ROR
Add record:
Name of organization: Center for Molecular Biology of RNA
Website: http://rna.ucsc.edu/rnacenter/
Domains:
Link to publications:
Organ…
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### Data Owner Name
NHGRI
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://www.encodeproject.org/
### Social Media Handle
Alys…
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Hi there,
I want to find out what protocol I should follow when annotating a genome with short and long read RNA-Seq (nanopore) and protein data.
In this issue https://github.com/Gaius-Augustus…
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Hello,
I have been investigating some odd results for an OrthoFinder run using NCBI data and new annotations from about 15 species of ducks and other fowl, and I think that I have found a bug in th…
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### Analysis Environment
- [x] Installation of `scverse` tools
- [ ] #19
### Analysis Steps
- **Preprocessing**
- [ ] #9
- [ ] #14
- [x] #4
- **Cell typing**
- [ ] #16
- [ ] #3
…