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Hi Joey,
I have a follow up question from the closed Issue#287 How does estimate_richness deal with uneven sequencing depth?
I have used plot_richness and estimate_richness with boxplot function to …
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In my field of research, it is very common to remove and/or insert custom DNA sequences in microbial genomes. I would like to make the same changes _in silico_ in the FASTA file of the reference genom…
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Hi all.
I am currently trying to use metamos on my university HPC facility. I am receiving the following error when during the find ORFs stage.
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************************_ERROR**_**************…
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Hello,
My run of metAMOS stops with error at various points.
If I try Preprocess and Postprocess only, it stops at Validate.
If I try Preprocess, Assemble, Postprocess only, it stops at Mapreads.
I t…
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Dail writes:
2) In the Archaea, Bacteria, and microbial parts of Eukarya there are several deep nodes that have been introduced due to purely molecular work. Though these are unique rDNA sequences, …
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Add mouseover definitions for technical terms:
- [x] OTU
- [x] beta diversity
- [x] alpha diversity
- [x] ordination
@gregcaporaso will add definitions here, and @jrrideout will add the mouseover fu…
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1). Split each OTU into sample and control tables to determine which negative control otus to substract
a). echo "split_otu_table.py -i /home/gifl2111/scratch/SMP/split_otu_table_by_body_site/Fore…