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Kept forgetting to write this one up.
Now that family-based phasing is implemented, single-parent families can/should also be phased (i.e. when only one parent is available).
The parent and child …
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I updated bcbio to use the more robust dbNSFP VEP annotation and am getting an error I haven't seen before.
[2017-02-06T18:02Z] Ensemble consensus calls for Kindred_87: samtools,platypus,gatk-hap…
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Hello,
I installed gemini v0.18.3 as follows:
```
wget https://raw.github.com/arq5x/gemini/master/gemini/scripts/gemini_install.py
/usr/bin/python gemini_install.py /home/rathik/tools /home/rathik/d…
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IDK what's happened, but this is what I get in syslog:
`Apr 14 15:05:46 osiris kernel: [ 2579.294950] e2guardian[1831]: segfault at 478d178 ip 00007f048e2ffef3 sp 00007f02ecde4238 error 4 in libc-2…
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Several others open source emulators have a buildbot, I think it would help quite who doesn't have a visual studio license or has no interest in installing it just to compile the emulator.
The web pa…
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Hi there,
I've been trying to set up an instance of varapp, but I'm stuck at the database migrations step.
Per the [documentation](https://varapp-demo.vital-it.ch/docs/src/deployment.html) it should…
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Following the installation instructions at https://gemini.readthedocs.org/en/latest/content/installation.html#automated-installation I do this:
```
wget https://github.com/arq5x/gemini/raw/master/gem…
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Hi,
My environment:
OS: Windows10
node --v: v4.6.0
npm --v: 3.4.0
"gemini --version": 4.11.3
PhantomJS is running on port 4444 like below:
![image](https://cloud.githubusercontent.com/assets/56009…
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```
[k0ste@WorkStation linux-4.12]$ patch -p1 -i /tmp/linux-4.8-ndpi.diff
patching file include/net/netfilter/nf_conntrack_extend.h
Hunk #2 FAILED at 113.
1 out of 2 hunks FAILED -- saving reject…
k0ste updated
7 years ago