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For lack of a better place, I'm putting this bikeshed in the website repo.
Some people I talk to get hung up with the name JuliaAstro - the adjacent "a"s at the end of "Julia" and at the start of "As…
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In 99% of my use cases l just want to read the whole bed file and get a vector of records. Doing so requires quite a bit of boilerplate :
```
# Import the BED module.
using BED
# Open a BED fi…
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Is there anything available for inferring the FASTA record type from the sequence?
In earlier versions of FASTX I think this was done by default, and all of the records read in by `Readers` were re…
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Hi BioAlignments,
Just wanted to put in a friendly request for API changes to [follow Julia's `@deprecate`](https://docs.julialang.org/en/v1/base/base/#Base.@deprecate) pattern for API changes plea…
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BioCore.Ragel module should either be moved, renamed, or both.
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I'm trying to write data to a BigBed file on each human chromosome, I defined my writer as such :
```julia
writer = BigBed.Writer(file, [(chr, length(genome[chr])) for chr in chrs])
```
With `…
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We have our own registry for a bunch of lab internal stuff. Can I use Registrator for that use case? How would I configure it so that it works on our own registry, and not the General public one?
I…
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Would you be open to having an AbstractIntervalTree? I'd like to experiment with a GenomicRanges type and I'd like to inherit from AbstractIntervalTree.
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I tried to install the package in Julia 1.10,
but when I follow the example I get the following error:
```MethodError: no method matching genearrow(::Dict{Any, Any}, ::Luxor.Point, ::Luxor.Point, ::…
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I have tried writing a julia script to subset lines out of a gzipped file. The file (a fastq file) has records that are 4 lines long. So I take 4 lines from the input file, and a fraction of the tim…