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See https://github.com/biolink/biolink-model/issues/1156
We are saying Activity, @karafecho thinks ClinicalIntervention may be better. My guess is that this is being handled by the leftover UMLS h…
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I'm not sure why this is, but it would be nice to get back to our previous rapid startup time, if possible.
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Write generic SPARQL queries to transform OWL BioPax in BioLink
For pathwaycommons for example: http://www.pathwaycommons.org/archives/PC2/v10/PathwayCommons10.All.BIOPAX.owl.gz
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Map the generated HCLS metadata to the BioLink model.
BioLink have classes equivalent to dataset, version, distribution:
https://biolink.github.io/biolink-model/docs/DataSet.html
Should we us…
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### Describe the bug
See https://github.com/monarch-initiative/monarch-ingest/issues/468#issuecomment-1564660130
Biolink imports linkml types (see https://github.com/biolink/biolink-model/blob/m…
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TMKP represents their text snippets in a way that the UI is able to display them. In contrast, for SemMedDB, the UI only displays the first sentence of the abstract. More analysis on what BTE is doi…
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UI team is eager to work with the edge-level pathway information being returned by BTE via PFOCR as a KP. Currently, we just have a flat list of `values` including the figureUrl and PMCID. Ideally, t…
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Broad issue to track progress and information about MCQ
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I got a question about a Translator QA issue that included this edge as coming from the SRI Reference KG
`MONDO:0009477----biolink:has_phenotype----MONDO:0009022`
I was surprised to see that t…
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This fails to return results through the ARS, but can return results when sent to ARAX directly. Please investigate
```json
{
"workflow": [
{
"id": "fill"
},
{
"id"…