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Currently, we are modifying an existing DLSIA function [`train_segmentation`](https://github.com/phzwart/dlsia/blob/f3f50a78faeb99aca4b9725ffa63c7b95c0613df/dlsia/core/train_scripts.py#L55) to write/e…
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Ability to set additional cell parameters such synapse, biophysics, and geometry.
The old GUI had the ability to set more cell parameters. The Gamma tutorial includes changing L5 pyr synapse GABAA …
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Error using set
Unrecognized property Color for class Patch.
Error in draw_graph (line 103)
set(h_edge,'Color',color.edge)
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Hi! I'm trying to export my .hoc file to NML2. I receive these errors. Basically it tries to load `erev` for the mechanism that does not have it.
```
Traceback (most recent call last):
File "/hom…
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Hi Jonas,
I contact you as I encounter a problem when I try to reconstruct a 3D image. Since my images are obtained with a sCMOS camera I ask for the sCMOS variance to be corrected in the "Peak fin…
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loads of tests still failing on python 3. This one is run by azure:
https://dev.azure.com/cctbx/cctbx_project/_build/results?buildId=184
```
Standard error:
Traceback (most recent call last)…
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Hi,
I've installed cctbx-base using conda. I copied `chem_data` directory to `${CONDA_PREFIX}/lib/python3.11/site-packages/` and i had to export the variable `$CLIBD_MON` for the monomers library.…
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From discussion with Oksana:
The current geometric primitives (spheres, cuboids, cylinders, etc) are abstractions of sets of voxels in a 3D grid. Assuming the voxels are intended to be of equal size …
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```
We are unsure how well the upload / update methods from wbc-server are actually
working right now, since it has been a while since we tried them out. We need
to give them a shot. The summer in…
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```
We are unsure how well the upload / update methods from wbc-server are actually
working right now, since it has been a while since we tried them out. We need
to give them a shot. The summer in…