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OpenTargets is an EBI project which we would like to link out to. I just added the BridgeDb record for it: https://github.com/bridgedb/datasources/commit/d1311c5fb9e589d65ad602dae41398c6e36b9078
Th…
egonw updated
3 years ago
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To have uniformity over the different programming languages, rename the first function to maps (see https://github.com/bridgedb/BridgeDbR/tree/master/R)
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Marvin:
- [x] Provide list of phenols (EU-ToxRisk test compounds)
Martijn:
- [ ] Write Jupyter notebook that uses list of compounds, looks up data in TGGATES
- [ ] Look up is these are in …
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tor is censored in my country.
how can i force torghost use BridgeDB IPs?
or enter manually the bridge IP that i know.
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Add the common name of a species (besides the Latin one) to help people search here https://www.bridgedb.org/data/gene_database/ as a new column
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As requested at https://github.com/bridgedb/tiwid/commit/a22c47056546c603aff7be85a721ac4c2e814211#commitcomment-89788087
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ConceptWiki void has justifications like
```
www_uniprot_org_uniprot-gene.ttl: dul:expresses ;
www_uniprot_org_uniprot-protein.ttl: dul:expresses ;
```
These should be replaced with proper j…
stain updated
9 years ago
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And see if you can start filling out personal info, and possibly upload the current version as "draft". Then other mentors can also start looking at it, and possibly ask questions. So, these mentors a…
egonw updated
5 years ago
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- [x] Add syscodes for species to bridgedb website
- [ ] write documentation for running code
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Because https://www.wikidata.org/wiki/Q105185517 is reported by Jenkins as missing, so possibly indeed missing from the BridgeDb file.
egonw updated
2 years ago