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Project UUID: a9c022b4-c771-4468-b769-cabcf9738de3
Project Title: Comparison, calibration, and benchmarking of high-throughput single cell RNA-Seq techniques for unbiased cell-type classification
Pr…
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I think we all agree that having a means to record markers used in FACS sorting
of cells is an important and useful. But there is an ongoing issue in CL with
species specificity and these axiom…
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- [ ] [Correlated gene modules uncovered by high-precision single-cell transcriptomics](https://www.pnas.org/doi/abs/10.1073/pnas.2206938119)
- [x] [Dynamics of single-cell protein covariation during…
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**Is your request related to a specific disease? Please describe.**
purine-pyrimidine metabolic disorder (DOID:653)
**Describe the proposed change(s)**
based on the wikipedia reference used for…
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Supporting lifted edges would enable better modeling of long range information across time. Lifted edges only provide a contribution to the cost, but not to the connectivity.
## Motivation
We so…
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Building_classification has this error when running.
`---------------------------------------------------------------------------
IndexError Traceback (most recent ca…
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CL currently has hierarchies for neuroblast (vertebrate) and NPC:
* [] CL:0000055 ! non-terminally differentiated cell "A precursor cell with a limited number of potential fates."
* [i] **CL:0…
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Hi,
The more I look at garnett, the more promising it seems, thanks for developing it!
But currently it requires very detailed specification of cell type markers, which is not always intuitive. An…
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Hi! I defined my custom_metric function following your documentation:
`def custom_metric(X_val, y_val, estimator, X_train, y_train, weight_val=None, weight_train=None):
start = time.time()
…