-
From Jared @Jared Nedzel :
Folks, I’m working on the GTEx C2M2 submission and have some followup ontology questions from our meeting last week.
First, I wanted to confirm how we deal with compress…
-
## Hypothesis
Limiting the length of runs (not the length of logical arrays) is going to prevent multi-language integration pains at a very low storage/memory cost — compresssing ~2B elements into …
-
**Is your feature request related to a problem? Please describe.**
At the moment it appears the `CSVLoader` can only load `.csv` files from the disk or a file system. Which could be a limitation both…
-
## Bug report
Nextflow tasks metadata is stored into a local embedded key-value database based on [LevelDB](https://github.com/dain/leveldb).
This provides good performance, however, the Level…
-
It looks like at least one contributor to the Parquet standard is interested in adding a first-class logical GEOMETRY type ( https://github.com/apache/parquet-format/pull/240 )! There's quite a bit of…
-
I'm trying to catch up on what's been going on in the world of alternat vcf representations and I'm trying to understand what the benefits of savvy are vs bcf. I've run into a few questions.
1. I…
-
This issue addresses the section titled _Research best practices when working with Arrow_ of #10088. As outlined below, Arrow was not a simple drop-in to the existing storage read path. Some explorato…
-
**Is your feature request related to a problem? Please describe.**
Loki's index design is quite simple, it require every series must have at least one chunk in ingester's memory, and then flush this …
-
Reducing heap usage while building completed segments. Currently, the segment builder is designed to read incoming data row by row, and build dictionaries in a hash table before translating them to th…
-
Pillow (and PIL) is currently able to open 8 bit per channel multi-channel images (such as RGB) but is able to open higher bit depth images (e.g. I16, I32, or Float32 images) if they are single channe…