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statgen
/
savvy
Interface to various variant calling formats.
Mozilla Public License 2.0
26
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5
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sav concat commend
#34
Nahyeon203
opened
3 weeks ago
3
Probably typo in assert
#33
serzero2007
closed
4 months ago
1
sav merge command?
#32
mragsac
opened
1 year ago
1
Failed to build statgen/savvy
#31
Welz2
closed
1 year ago
7
Error isntalling this package for saige
#30
akhilpampana
opened
1 year ago
9
Fix headers populated by --generate-info
#29
jonathonl
opened
1 year ago
0
Savvy has missing #includes that could cause portability problems
#28
pettyalex
closed
2 years ago
1
Fix build on Ubuntu 22.04: Add missing #includes
#27
pettyalex
closed
2 years ago
0
Build failure on Ubuntu 22.04
#26
pettyalex
closed
2 years ago
2
Download failed with error 404 for: //zlib.net/zlib-1.2.11.tar.gz
#25
psammarco
closed
2 years ago
2
Scalability issues
#24
h-2
opened
2 years ago
11
Build failure related to crossplatform sprintf: expected ')' before 'PRId64'
#23
pettyalex
closed
2 years ago
9
Cannot build savvy because sourceforge xz is down
#22
pettyalex
closed
2 years ago
2
Fix arm64 build failure caused by char being unsigned
#21
pettyalex
closed
2 years ago
3
Build failure on arm64: Templates not found because char is unsigned
#20
pettyalex
closed
2 years ago
9
Sample extraction fails with -O bcf
#19
rick-heig
opened
2 years ago
1
Output test file has an allele missing
#18
rick-heig
closed
2 years ago
4
statgen/savvy install error
#17
lanxianmei
closed
2 years ago
2
Parameter trade-off suggestions
#16
rick-heig
closed
2 years ago
2
Standalone `sav` program
#15
rick-heig
closed
3 years ago
2
Problem building savvy
#14
Reavyr
opened
3 years ago
1
Problem building savvy
#13
wrathematics
closed
2 years ago
10
improve const correctness of comparison operator
#12
CreRecombinase
closed
3 years ago
1
Understanding sav benefits.
#11
lbergelson
opened
3 years ago
2
conda package
#10
matuskosut
closed
3 years ago
4
SAIGE installs fail because statgen/savvy can't be accessed (Centos 6.x)
#9
jbsysadmin
opened
4 years ago
1
error: 'isnan' is not a member of 'std'
#8
welchr
closed
5 years ago
1
Export multiple FORMAT fields to VCF
#7
jonathonl
closed
3 years ago
1
sav export vcf / AF is updated MAF not
#6
ilarsf
closed
5 years ago
2
no warning if sample-ids-file is missing
#5
ilarsf
closed
5 years ago
3
Merge headers during concat
#4
jonathonl
closed
5 years ago
1
Update index during concat
#3
jonathonl
closed
3 years ago
1
Alpha-2 Merge
#2
jonathonl
closed
6 years ago
0
Support Additional VCF Format Fields
#1
jonathonl
closed
6 years ago
0