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Nextflow command:
```
nextflow run nf-core/sarek -profile docker --input samplesheet.csv --outdir sarek-chop-output
```
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I'd like the description and process of obtaining the background file to be clearer.
The website `genome2d.molgenrug.nl` is mentioned as a possible source, but the website has a lot of functionalit…
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Reposted from the original question of @MG-DYM
Hi Sir,I want to use T2T-genome and its transcripts.gtf to builde the Reference.It's going wrong at :
Jul 04 21:37:17 ..... started STAR run
Jul …
dg520 updated
1 month ago
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I am trying to run query_pan_genome
roughly like this:
query_pan_genome -g clustered_proteins -o output.txt -a difference -i 1.gff,2.gff -t 3.gff
I also tried replacing the -i and -t with --inpu…
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Dear all,
I am running **SynTracker v1.3.0** on a haploid fungal reference genome with the default parameters.
For many of the .tab BLAST output files I get an error message, that it contains **…
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### Description of the bug
Singularity container retrieval failed when trying to download the nf-core/sarek pipeline. While making image from oci registry I got an error fetching image to cache and f…
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### Description of the bug
Hello,
I encountered this error using DCC.
### Command used and terminal output
```console
nextflow pull nf-core/circrna
nextflow run nf-core/circrna \
-r dev \
…
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Thanks for sharing this amazing tool! I am running like this:
```
kdb --db-type standard --threads 30 --cache-dir .
```
And I continue to get an error like this:
```
subprocess.CalledProce…
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Dear get_phylomarkers team
Recently, I conducted an analysis using get_phylomarkers based on the core genome calculated through get_homologues, and in the final part of the analysis, it abruptly te…
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Dear BitmapperBS developer,
I installed the latest bitmapperBS (v1.0.2.3) by git clone the source code and make (GCC version 9.4.0), the installation works well, I can see bitmapperBS and psascan …