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it should handle more cases:
- when the data in Tercen is downsampled/filtered it should still be possible to upload the result in FlowJo
- import gives an error when it is done from a subpopulation
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Hi there, I am working to export gated cell populations from a FlowJo workspace to an R data frame. My code fetches cells for the first few gates, and then I get a blank matrix; there are no errors. A…
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Hey friends ... I'm curious how I might work around this issue below. I've loaded xml as a ws, but when I try to get the gating set to tap into data for a few gates in particular, it's objecting to t…
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The existing gate extension rationale was detailed in RGLab/flowWorkspace#36, basically it is a heuristic fix for the issue of truncated gate coordinates recorded in flowJo xml workspace. i.e. wheneve…
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Hello,
Thank you for the great package!
I wanted to extract the manual labels with the function "GetFlowJoLabels" so that I can establish a comparison between manual and automated. Unfortunatel…
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When trying to load a gating set
```r
> print(my_wsp)
[1] "/Users/timdohm/sci/raw_data/TC001V2/TC001V2_Tfh.wsp"
> test_ws print(test_ws)
File location: /Users/timdohm/sci/raw_data/TC001V2/TC001…
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Hi,
I see this question has been asked before but I am not sure if the problem is solved now: I want to select certain cell populations by gating in a scatter plot but it seems I cannot create gates …
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This feature has been requested in the past (e.g. RGLab/flowWorkspace#211 , RGLab/flowWorkspace#197),
We want to be able to parse the gates from flowJo template and apply to the FCS files or `Gati…
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Dear flowStats team,
During the last few days, I have been testing the compensation in flowStats (spillover_ng()) and have come accross a couple of issues.
Here is one of them :
in function sp…
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Hello,
I would like to export manual gates and phenograph clusters as csv files. I tried it but the HistoCAT in my computer is only able to export them as fcs.
With FlowJo I opened the fcs files (…