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SofieVG
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FlowSOM
Using self-organizing maps for visualization and interpretation of cytometry data
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Error in PlotStars and FlowSOMmary in code that previously worked
#65
zokolo
closed
6 months ago
1
Can't get GetFlowJoLabels() to match gating in FlowJo workspace
#64
gmillerscripps
opened
6 months ago
0
GetFlowJoLabels
#63
Aminach1
opened
6 months ago
1
Clusters with similar marker expression level are not clustered in the same metacluster
#62
ha-le-git
opened
1 year ago
2
Using `importance` argument for SOM mapping?
#61
mdmanurung
closed
1 year ago
2
Error while using GetFeatures to map files
#60
maiabennett
closed
1 year ago
5
unable to find an inherited method for function ‘compensate’ for signature ‘"flowFrame", "NULL"’
#59
yueli8
opened
1 year ago
2
Porting FlowSOM to python
#58
ngreenwald
closed
1 year ago
1
AggregateFlowFrames with channels given produces error
#57
baj12
opened
1 year ago
1
Building error on Bioconductor
#56
Kayla-Morrell
closed
1 year ago
3
Long Vectors error in SOM Function (Analogous to issue #54)
#55
jonhsussman
opened
1 year ago
4
Calling MapDataDataToCodes produces long vectors error
#54
jonhsussman
opened
1 year ago
8
Release version out of date compared to Flowjo Plugin.
#53
AlexanderWMacFarlaneIV
closed
1 year ago
4
Add support for flowSets in AggregateFlowFrames
#52
DillonHammill
closed
2 years ago
0
Change default argument of `map` in `SOM` to `TRUE`
#51
alex-l-kong
closed
1 year ago
3
Add option to return just the weights from the`SOM` function
#50
alex-l-kong
closed
1 year ago
0
FlowSOM installation issues with boost library
#49
alex-l-kong
opened
2 years ago
0
No output
#48
jjoel212
opened
2 years ago
0
Speedup when threshold < 1
#47
SamGG
opened
2 years ago
0
Elbow plot variance calculation
#46
Jeff87075
opened
2 years ago
3
Calling FlowSOM:::MapDataToCodes produces a segmentation fault
#45
alex-l-kong
closed
3 years ago
3
GetFlowJoLabels error: FCS files not found
#44
vetgreg
closed
3 years ago
2
Accessing MapDataFromCodes in FlowSOM/installation error using devtools
#43
alex-l-kong
closed
3 years ago
7
Is the integer cast in abs() really intended?
#42
LTLA
closed
3 years ago
3
SOM should protect against inputs with no column names
#41
LTLA
closed
3 years ago
6
Question som$map$codes
#40
fbenedett
closed
3 years ago
2
TestOutliers
#39
SamGG
opened
3 years ago
0
Exporting MapDataToCodes function
#38
SamGG
closed
3 years ago
4
Loading FlowSOM package fails
#37
JPGranizo
closed
3 years ago
4
Query - FlowSOM
#36
santoshe1
closed
3 years ago
2
Add seed for automatic meta cluster inference
#35
ghar1821
closed
3 years ago
3
BuildSOM produces NaN/Infs error on the C part
#34
pcm32
closed
4 years ago
3
FlowSOM fails after CytoNorm
#33
vivek-verma202
closed
4 years ago
1
Can FlowSOM be used for scRNA-seq data?
#32
EDYAC
closed
3 years ago
2
error while parsing workspace with fcs files
#31
IvanaOsredek
opened
4 years ago
1
Error while using CountGroups Function
#30
pablasimarjot
closed
3 years ago
1
Initialize BuildMST with grid layout
#29
exaexa
closed
4 years ago
2
getIndiceMat not exported by new flowWorkspace version
#28
DillonHammill
closed
4 years ago
3
Installation of FlowSOM failed
#27
akhst7
closed
4 years ago
4
Change scale settings on MST
#26
bspurgeon
opened
5 years ago
0
Save PlotStars command
#25
fbenedett
closed
5 years ago
4
Fix creating scaled.scale and scaled.center
#24
exaexa
closed
5 years ago
2
SaveClustersToFCS
#23
roskcl
opened
5 years ago
1
SaveClusters ToFCS with multiple data segments
#22
jaybob66
opened
5 years ago
2
Add PCA-based codebook initialization.
#21
exaexa
closed
5 years ago
0
Fix the logic of checking codebook size
#20
exaexa
closed
5 years ago
0
FlowSOMSubset does not subset CV values
#19
stu-blair
opened
5 years ago
0
prettyColnames usage
#18
SamGG
closed
5 years ago
1
ReadInput/AddFlowframe: doc
#17
SamGG
opened
5 years ago
6
NewData: doc & example
#16
SamGG
closed
5 years ago
1
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