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A tractogram produced using HCP 100307 had streamlines that were biologically implausible. Initial tests suggest this is from 5TTgen algorithm type.
FSL did not generate an irregular tractogram.
We …
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Hi all,
I was using the oxasl with FSL version 6.0.1 and it was running well. Last week I updated my FSL to 6.0.4 and when using oxasl (or oxford_asl), the Step 2 of BASIL analysis is taking too mu…
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Hi there,
Apologies for another question but I am having trouble with the fsl_onset_extraction function in clpipe. I made a BIDS formatted events file (nback_events.tsv below) but I had some questi…
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The current pruning process implicitly assumes that the example data on which the external software scripts are run are sufficient to explore the full set of commands that may be invoked by those scri…
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**Describe the bug**
I am encountering an error when downloading genome summary for the 2975324 taxid
**Version**
```sh
$ datasets version
datasets version: 16.27.1
```
**To Reproduce**
`…
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Hi there,
I get an error when trying to run fsl_topup_epi_eddy. I am using Python 3.10, and have FSL v6.0.4. I see that eddy_openmp is not located in fsl/usr/bin; it seems that it is no longer pre…
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### Description
It seems that hte Functional Source License got an update and now there is also a 1.1 license (scancode currently only has 1.0):
https://fsl.software/
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This stems from https://github.com/bids-standard/bids-specification/issues/349, which proposed supporting the MRtrix-format tsv file as an optional alternative to FSL-format bval and bvec files. For B…
tsalo updated
4 months ago
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Write a github action that validates a `fsl` machine
Write a separate github action that lints a `fsl` machine
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**Description**
I build a 64-bit system based on "Kirksone" branch and I meet a problem with the GPU hardware acceleration on Raspberry 4/CM4. The problem occurs when playing video directly from GS…